Gene detail information of Glyur001144s00035322.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G44170.24.00E-76aldehyde dehydrogenase 3H1
NRAES72293.20NAD-dependent aldehyde dehydrogenase family protein [Medicago truncatula]
COGYP_007145296.18.00E-91NAD-dependent aldehyde dehydrogenase [Cylindrospermum stagnale PCC 7417]
Swissprottr|Q8VXQ2|ALDH_CRAPL3.00E-142Aldehyde dehydrogenase
trEMBLtr|G7J4Y0|G7J4Y0_MEDTR0Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011447304780137-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00128ALDH EC:1.2.1.3 Glycolysis / Gluconeogenesis map00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001144s00035322.1PF00171.17Aldedh21733.20E-27
Glyur001144s00035322.1PF00171.17Aldedh1853255.90E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.598
SRR1783600control31.819
SRR1783602moderate drought stress31.443
SRR1811619moderate drought stress30.556

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.301
DRR006520Root Summer glycyrrhizin high producing strain21.518
DRR006521Root Winter glycyrrhizin high producing strain221.268
DRR006522Root Winter glycyrrhizin high producing strain212.989
DRR006523Root Summer glycyrrhizin low producing strain56.398
DRR006524Root Summer glycyrrhizin low producing strain55.338
DRR006525Leaf Summer glycyrrhizin high producing strain2.188
DRR006526Leaf Summer glycyrrhizin high producing strain2.035

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)77.004
SRR2868004Drought Stress(Tissue:root)115.307
SRR2967015Control (Tissue:root)85.248

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.990
SRR9715740Leave7.711
SRR9715741Leave34.847
SRR9715739Root36.581
SRR9715742Root91.485
SRR9715743Root79.600

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h294.027
SRR8749028MeJA induced 9h763.234
SRR8749029MeJA induced 9h534.499
SRR8749030Uninduced1448.260
SRR8749031Uninduced1667.361
SRR8749032Uninduced922.278

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root159.995
SRR8400027Control-Root127.390

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved