Gene detail information of Glyur001146s00038073.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44500.1 | 1.00E-179 | O-fucosyltransferase family protein |
| NR | XP_004506509.1 | 0 | PREDICTED: uncharacterized protein At1g04910-like [Cicer arietinum] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 4.00E-42 | Uncharacterized protein At1g04910 |
| trEMBL | tr|V7AJY4|V7AJY4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW05844.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01146 | 8589 | 12201 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001146s00038073.1 | PF10250.4 | O-FucT | 194 | 235 | 3.70E-10 |
| Glyur001146s00038073.1 | PF10250.4 | O-FucT | 259 | 399 | 1.60E-19 |
| Glyur001146s00038073.1 | PF10250.4 | O-FucT | 400 | 469 | 2.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.906 |
| SRR1783600 | control | 3.036 |
| SRR1783602 | moderate drought stress | 3.310 |
| SRR1811619 | moderate drought stress | 3.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.441 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.996 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.305 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.982 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.942 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.730 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.836 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 21.293 |
| SRR2868004 | Drought Stress(Tissue:root) | 27.378 |
| SRR2967015 | Control (Tissue:root) | 21.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.520 |
| SRR9715740 | Leave | 11.525 |
| SRR9715741 | Leave | 31.675 |
| SRR9715739 | Root | 27.377 |
| SRR9715742 | Root | 64.380 |
| SRR9715743 | Root | 54.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 311.876 |
| SRR8749028 | MeJA induced 9h | 605.780 |
| SRR8749029 | MeJA induced 9h | 505.124 |
| SRR8749030 | Uninduced | 648.490 |
| SRR8749031 | Uninduced | 419.452 |
| SRR8749032 | Uninduced | 440.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.126 |
| SRR8400027 | Control-Root | 21.959 |