Gene detail information of Glyur001147s00029000.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01540.21.00E-125Protein kinase superfamily protein
NRXP_004492785.10PREDICTED: probable serine/threonine-protein kinase At1g01540-like [Cicer arietinum]
COGYP_634544.14.00E-08serine/threonine protein kinase Pkn2 [Myxococcus xanthus DK 1622]
Swissprottr|Q3EDL4|Y1154_ARATH2.00E-179Probable serine/threonine-protein kinase At1g01540
trEMBLtr|G7L6L4|G7L6L4_MEDTR0Brassinosteroid insensitive 1-associated receptor kinase {ECO:0000313|EMBL:AES80271.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011474886352735+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001147s00029000.1PF07714.12Pkinase_Tyr1742743.00E-16
Glyur001147s00029000.1PF07714.12Pkinase_Tyr2823857.30E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control33.501
SRR1783600control33.744
SRR1783602moderate drought stress63.929
SRR1811619moderate drought stress63.777

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain36.629
DRR006520Root Summer glycyrrhizin high producing strain35.599
DRR006521Root Winter glycyrrhizin high producing strain7.313
DRR006522Root Winter glycyrrhizin high producing strain7.204
DRR006523Root Summer glycyrrhizin low producing strain49.726
DRR006524Root Summer glycyrrhizin low producing strain48.178
DRR006525Leaf Summer glycyrrhizin high producing strain14.961
DRR006526Leaf Summer glycyrrhizin high producing strain14.943

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.913
SRR2868004Drought Stress(Tissue:root)44.769
SRR2967015Control (Tissue:root)55.407

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.471
SRR9715740Leave8.679
SRR9715741Leave14.732
SRR9715739Root17.878
SRR9715742Root38.246
SRR9715743Root38.344

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.359
SRR8749028MeJA induced 9h6.399
SRR8749029MeJA induced 9h6.012
SRR8749030Uninduced7.250
SRR8749031Uninduced0.654
SRR8749032Uninduced0.613

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.773
SRR8400027Control-Root34.326

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved