Gene detail information of Glyur001149s00024730.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G14550.11.00E-110Peroxidase superfamily protein
NRAES90060.20lignin-forming anionic peroxidase [Medicago truncatula]
Swissprottr|Q02200|PERX_NICSY2.00E-142Lignin-forming anionic peroxidase (Precursor)
trEMBLtr|G7JIS0|G7JIS0_MEDTR0Lignin-forming anionic peroxidase {ECO:0000313|EMBL:AES90060.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011491667918286+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001149s00024730.1PF00141.18peroxidase452752.00E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.140
SRR1783600control0.148
SRR1783602moderate drought stress0.081
SRR1811619moderate drought stress0.067

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.331
DRR006520Root Summer glycyrrhizin high producing strain0.343
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.000
DRR006526Leaf Summer glycyrrhizin high producing strain0.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.143
SRR2868004Drought Stress(Tissue:root)2.106
SRR2967015Control (Tissue:root)0.524

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.169
SRR9715740Leave0.041
SRR9715741Leave2.177
SRR9715739Root0.023
SRR9715742Root0.541
SRR9715743Root0.033

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.116
SRR8749028MeJA induced 9h6.208
SRR8749029MeJA induced 9h6.030
SRR8749030Uninduced206.364
SRR8749031Uninduced53.148
SRR8749032Uninduced14.026

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.556
SRR8400027Control-Root5.107

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved