Gene detail information of Glyur001150s00037548.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54160.15.00E-49O-methyltransferase 1
NRKEH40859.14.11E-115caffeic acid O-methyltransferase [Medicago truncatula]
COGYP_007130428.11.00E-09O-demethylpuromycin O-methyltransferase [Gloeocapsa sp. PCC 7428]
Swissprottr|P93324|CHOMT_MEDSA2.00E-72Isoliquiritigenin 2'-O-methyltransferase
trEMBLtr|A0A072VFU6|A0A072VFU6_MEDTR2.00E-115Caffeic acid O-methyltransferase {ECO:0000313|EMBL:KEH40859.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011502259824095+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13066E2.1.1.68, COMT EC:2.1.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

molecular_function

GO:0008168  methyltransferase activity

GO:0008171  O-methyltransferase activity

GO:0046983  protein dimerization activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001150s00037548.1PF08100.6Dimerisation37862.50E-15
Glyur001150s00037548.1PF00891.13Methyltransf_21362288.80E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control537.600
SRR1783600control536.774
SRR1783602moderate drought stress471.329
SRR1811619moderate drought stress468.893

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.544
DRR006520Root Summer glycyrrhizin high producing strain0.660
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain4.419
DRR006526Leaf Summer glycyrrhizin high producing strain5.255

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)480.108
SRR2868004Drought Stress(Tissue:root)334.656
SRR2967015Control (Tissue:root)271.834

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.628
SRR9715740Leave0.588
SRR9715741Leave0.160
SRR9715739Root82.230
SRR9715742Root302.813
SRR9715743Root236.909

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.140
SRR8749028MeJA induced 9h4.368
SRR8749029MeJA induced 9h2.794
SRR8749030Uninduced14.051
SRR8749031Uninduced19.342
SRR8749032Uninduced5.176

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1247.738
SRR8400027Control-Root998.978

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved