Gene detail information of Glyur001155s00025129.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04240.10Tetratricopeptide repeat (TPR)-like superfamily protein
NRXP_004495555.10PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC-like isoform X2 [Cicer arietinum]
COGYP_007149233.13.00E-139TIGR03032 family protein [Cylindrospermum stagnale PCC 7417]
Swissprottr|Q9M8Y0|SEC_ARATH0Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC
trEMBLtr|G7I5N5|G7I5N5_MEDTR0Peptide-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:AES61156.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01155898919779+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT41


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09667OGT EC:2.4.1.255 Other types of O-glycan biosynthesis map00514
Insulin resistancemap04931


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001155s00025129.1PF00515.23TPR_11011290.026
Glyur001155s00025129.1PF13414.1TPR_111301955.70E-15
Glyur001155s00025129.1PF07719.12TPR_21992300.00042
Glyur001155s00025129.1PF13414.1TPR_112372979.20E-15
Glyur001155s00025129.1PF00515.23TPR_13023286.50E-06
Glyur001155s00025129.1PF13414.1TPR_113313768.50E-11
Glyur001155s00025129.1PF13414.1TPR_113884501.20E-11
Glyur001155s00025129.1PF13844.1Glyco_transf_415677212.00E-69
Glyur001155s00025129.1PF13844.1Glyco_transf_417339271.20E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control134.914
SRR1783600control135.249
SRR1783602moderate drought stress144.661
SRR1811619moderate drought stress143.520

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain153.800
DRR006520Root Summer glycyrrhizin high producing strain151.013
DRR006521Root Winter glycyrrhizin high producing strain195.993
DRR006522Root Winter glycyrrhizin high producing strain190.224
DRR006523Root Summer glycyrrhizin low producing strain147.163
DRR006524Root Summer glycyrrhizin low producing strain147.809
DRR006525Leaf Summer glycyrrhizin high producing strain56.675
DRR006526Leaf Summer glycyrrhizin high producing strain56.586

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)89.057
SRR2868004Drought Stress(Tissue:root)114.951
SRR2967015Control (Tissue:root)103.582

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave93.351
SRR9715740Leave61.673
SRR9715741Leave125.763
SRR9715739Root31.588
SRR9715742Root154.473
SRR9715743Root135.354

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h377.472
SRR8749028MeJA induced 9h488.186
SRR8749029MeJA induced 9h404.231
SRR8749030Uninduced426.451
SRR8749031Uninduced414.944
SRR8749032Uninduced348.650

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root129.796
SRR8400027Control-Root116.518

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved