Gene detail information of Glyur001157s00034141.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32240.1 | 9.00E-47 | Homeodomain-like superfamily protein |
| NR | XP_007158256.1 | 6.39E-151 | hypothetical protein PHAVU_002G137300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9C616|KAN2_ARATH | 4.00E-93 | Probable transcription factor KAN2 |
| trEMBL | tr|V7CLW8|V7CLW8_PHAVU | 2.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:ESW30250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01157 | 20114 | 25496 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001157s00034141.1 | PF00249.26 | Myb_DNA-binding | 210 | 261 | 6.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.319 |
| SRR1783600 | control | 10.097 |
| SRR1783602 | moderate drought stress | 13.437 |
| SRR1811619 | moderate drought stress | 13.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.418 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.897 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.878 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.538 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.001 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.257 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.620 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.335 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.567 |
| SRR2967015 | Control (Tissue:root) | 8.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.736 |
| SRR9715740 | Leave | 5.144 |
| SRR9715741 | Leave | 5.472 |
| SRR9715739 | Root | 0.768 |
| SRR9715742 | Root | 5.033 |
| SRR9715743 | Root | 3.747 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.044 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.912 |
| SRR8400027 | Control-Root | 23.543 |