Gene detail

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Gene detail information of Glyur001158s00022956.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G17070.1	6.00E-84	Peroxidase family protein
NR	XP_003550481.1	0	PREDICTED: peroxidase 29-like [Glycine max]
Swissprot	tr\|Q9LSP0\|PER29_ARATH	3.00E-108	Peroxidase 29 (Precursor)
trEMBL	tr\|I1KNG5\|I1KNG5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G39290.1}

Sequence

Transcript Sequence

>Glyur001158s00022956.1
ATGACGTACCAACGTCCACGCACACTTTCCTTCTGCAGAGGAAAAAACAAAATGGAAAGGTCTTTTCCTTTGATTCTGCTTGCCACTGTGGTTATGGCAATGCCACTTTCATTTGCTATAAAAGAAAACCATCTTTCTTACAACTACTACCAGTTTTCATGTCCAAACTTGGAAAGCATAATCGAGAAAGAATTGCTCAGCTTATTCCTGACTGATGCTACTGCACCAGCAGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAGGGATGTGATGCCTCGATTTTGTTGGACTCCTCCAACTCCCTTACTCACAGCTCTGAAATGATTTCTTCGAGAAACTTTGGCATCAGAAATCGTGAAACAATCAGCCACATAAAATCAATATTAGAAGAACAATGTCCAGGACAGGTATCTTGTGCAGATATCATTGTATTGGCTGCTAAGGAATCAGTGTCATTCTCTGGAGGACCATGTATTCAAATCCCACTTGGAAGAAAAGACTCCAGAACTTGTAGTTTTAAGGAGGCTGATGCTAAGCTTCCTCCACCGACAACAACGGTTGATGAGTTTCTATCCGATTTCATATCTAAAGGAATGAGCATCGAAGAATCTGTTTCCATTTTAGGTGCACATACACTAGGGGTTGGACACTGCTTAAACATTGTTGGTAGATTGTATGATCAAGGGAAAAGGGAAAAGATGGATTNTAAGTTTGAGGCCTCACTGAGACTGGCATGCCCAACTGAGATTCCTGTGACAAACCTCACATTTGTGCCTAATGACATGACCCCAACGATATTTGACAACCATTATTACCGAGACATTATAATGGGGAGAGGCTTGTTTGGTATTGACTCAGACATTTCTAGAGATCCGAGAACTGCACCCTTTGTCATGAAGTTTGCTATGGATCAGAGCTACTTCTTTGAGGCCTTCTCATCTGCATTTGTCAAGCTTTCTTCTACCAATGTTCTCACAAATATGCAGGGTGATGTCCGAAGGAAATGCAACCAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01158	68744	70029	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function GO:0004601 peroxidase activity GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001158s00022956.1	PF00141.18	peroxidase	64	305	2.40E-58

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.024
SRR1783600	control	0.036
SRR1783602	moderate drought stress	0.068
SRR1811619	moderate drought stress	0.014

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.245
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.187

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.130
SRR2868004	Drought Stress(Tissue:root)	0.029
SRR2967015	Control (Tissue:root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.301
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.046
SRR8749028	MeJA induced 9h	0.070
SRR8749029	MeJA induced 9h	0.097
SRR8749030	Uninduced	0.131
SRR8749031	Uninduced	0.070
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.000
SRR8400027	Control-Root	0.029