Gene detail information of Glyur001161s00035401.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22480.12.00E-179phosphofructokinase 5
NRXP_003530616.10PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Glycine max]
COGYP_003806674.12.00E-846-phosphofructokinase [Desulfarculus baarsii DSM 2075]
Swissprottr|Q8VYN6|PFKA5_ARATH0ATP-dependent 6-phosphofructokinase 5, chloroplastic {ECO:0000255|HAMAP-Rule:MF_03186} (Precursor)
trEMBLtr|I1KX93|I1KX93_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G38450.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011611966226294+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00850pfkA, PFK EC:2.7.1.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Galactose metabolismmap00052
Methane metabolismmap00680
RNA degradationmap03018
AMPK signaling pathwaymap04152
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006002  fructose 6-phosphate metabolic process

GO:0006096  glycolytic process


molecular_function

GO:0003872  6-phosphofructokinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001161s00035401.1PF00365.15PFK1543913.20E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.276
SRR1783600control13.979
SRR1783602moderate drought stress8.114
SRR1811619moderate drought stress8.258

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.595
DRR006520Root Summer glycyrrhizin high producing strain12.214
DRR006521Root Winter glycyrrhizin high producing strain4.661
DRR006522Root Winter glycyrrhizin high producing strain4.378
DRR006523Root Summer glycyrrhizin low producing strain11.250
DRR006524Root Summer glycyrrhizin low producing strain11.189
DRR006525Leaf Summer glycyrrhizin high producing strain7.448
DRR006526Leaf Summer glycyrrhizin high producing strain7.198

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.006
SRR2868004Drought Stress(Tissue:root)24.307
SRR2967015Control (Tissue:root)22.409

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.092
SRR9715740Leave12.035
SRR9715741Leave11.994
SRR9715739Root7.666
SRR9715742Root15.521
SRR9715743Root12.790

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.512
SRR8749028MeJA induced 9h26.244
SRR8749029MeJA induced 9h16.356
SRR8749030Uninduced13.067
SRR8749031Uninduced5.468
SRR8749032Uninduced5.654

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.896
SRR8400027Control-Root28.157

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved