Gene detail information of Glyur001163s00025209.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G06925.1 | 8.00E-53 | Phospholipase A2 family protein |
| NR | XP_004513106.1 | 1.04E-91 | PREDICTED: phospholipase A2-alpha-like [Cicer arietinum] |
| Swissprot | tr|Q8S8N6|PLA2A_ARATH | 1.00E-65 | Phospholipase A2-alpha (Precursor) |
| trEMBL | tr|K7K119|K7K119_SOYBN | 3.00E-105 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G00541.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01163 | 17928 | 20157 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.503 |
| SRR1783600 | control | 10.726 |
| SRR1783602 | moderate drought stress | 4.429 |
| SRR1811619 | moderate drought stress | 4.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.277 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.764 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.116 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.123 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.753 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.752 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.769 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 43.920 |
| SRR2868004 | Drought Stress(Tissue:root) | 22.762 |
| SRR2967015 | Control (Tissue:root) | 18.735 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 14.186 |
| SRR9715740 | Leave | 3.889 |
| SRR9715741 | Leave | 4.544 |
| SRR9715739 | Root | 7.416 |
| SRR9715742 | Root | 9.735 |
| SRR9715743 | Root | 9.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.433 |
| SRR8749028 | MeJA induced 9h | 0.076 |
| SRR8749029 | MeJA induced 9h | 1.118 |
| SRR8749030 | Uninduced | 0.026 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 47.972 |
| SRR8400027 | Control-Root | 57.814 |