Gene detail information of Glyur001163s00025225.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56780.1 | 1.00E-80 | effector of transcription2 |
| NR | XP_007152922.1 | 0 | hypothetical protein PHAVU_004G171600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C7L8|V7C7L8_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW24916.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01163 | 78239 | 80777 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HRT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.244 |
| SRR1783600 | control | 0.238 |
| SRR1783602 | moderate drought stress | 0.131 |
| SRR1811619 | moderate drought stress | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.306 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.304 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.052 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.026 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.922 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.245 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.776 |
| SRR2967015 | Control (Tissue:root) | 1.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.433 |
| SRR9715740 | Leave | 0.178 |
| SRR9715741 | Leave | 0.034 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.354 |
| SRR9715743 | Root | 0.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.326 |
| SRR8749028 | MeJA induced 9h | 0.825 |
| SRR8749029 | MeJA induced 9h | 0.709 |
| SRR8749030 | Uninduced | 0.090 |
| SRR8749031 | Uninduced | 0.054 |
| SRR8749032 | Uninduced | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.898 |
| SRR8400027 | Control-Root | 1.151 |