Gene detail information of Glyur001164s00033513.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08650.18.00E-94phosphoenolpyruvate carboxylase kinase 1
NRXP_004495570.13.81E-177PREDICTED: phosphoenolpyruvate carboxylase kinase 1-like [Cicer arietinum]
COGYP_006921214.12.00E-37serine/threonine-protein kinase Sps [Thermacetogenium phaeum DSM 12270]
Swissprottr|Q9SPK4|PPCK1_ARATH5.00E-123Phosphoenolpyruvate carboxylase kinase 1
trEMBLtr|V7BDU8|V7BDU8_PHAVU8.00E-174Uncharacterized protein {ECO:0000313|EMBL:ESW16002.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011647897780482+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001164s00033513.1PF00069.20Pkinase92671.30E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control34.292
SRR1783600control34.518
SRR1783602moderate drought stress26.616
SRR1811619moderate drought stress26.761

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.500
DRR006520Root Summer glycyrrhizin high producing strain23.381
DRR006521Root Winter glycyrrhizin high producing strain2.982
DRR006522Root Winter glycyrrhizin high producing strain2.903
DRR006523Root Summer glycyrrhizin low producing strain18.114
DRR006524Root Summer glycyrrhizin low producing strain18.307
DRR006525Leaf Summer glycyrrhizin high producing strain9.797
DRR006526Leaf Summer glycyrrhizin high producing strain9.679

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)65.473
SRR2868004Drought Stress(Tissue:root)62.799
SRR2967015Control (Tissue:root)75.571

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.520
SRR9715740Leave2.525
SRR9715741Leave3.162
SRR9715739Root9.634
SRR9715742Root11.934
SRR9715743Root10.211

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.542
SRR8749028MeJA induced 9h0.102
SRR8749029MeJA induced 9h0.093
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.038

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root75.818
SRR8400027Control-Root72.668

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved