Gene detail information of Glyur001167s00034013.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14220.11.00E-36Flavin containing amine oxidoreductase family
NRNP_001236376.12.96E-70protoporphyrinogen IX oxidase [Glycine max]
COGYP_004151624.14.00E-17protoporphyrinogen oxidase [Thermovibrio ammonificans HB-1]
Swissprottr|Q94IG7|PPOCM_SPIOL2.00E-48Protoporphyrinogen oxidase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|K7MXD0|K7MXD0_SOYBN1.00E-71Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G25100.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011677475083368+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00231PPOX, hemY EC:1.3.3.4 1.3.3.15 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001167s00034013.2PF01593.19Amino_oxidase232295.10E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.471
SRR1783600control8.491
SRR1783602moderate drought stress8.238
SRR1811619moderate drought stress7.906

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.174
DRR006520Root Summer glycyrrhizin high producing strain11.535
DRR006521Root Winter glycyrrhizin high producing strain9.603
DRR006522Root Winter glycyrrhizin high producing strain8.189
DRR006523Root Summer glycyrrhizin low producing strain14.558
DRR006524Root Summer glycyrrhizin low producing strain16.174
DRR006525Leaf Summer glycyrrhizin high producing strain8.484
DRR006526Leaf Summer glycyrrhizin high producing strain8.053

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.022
SRR2868004Drought Stress(Tissue:root)20.235
SRR2967015Control (Tissue:root)19.965

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.905
SRR9715740Leave6.305
SRR9715741Leave6.698
SRR9715739Root3.410
SRR9715742Root9.005
SRR9715743Root7.729

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.960
SRR8749028MeJA induced 9h30.268
SRR8749029MeJA induced 9h15.201
SRR8749030Uninduced10.432
SRR8749031Uninduced15.099
SRR8749032Uninduced8.569

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.451
SRR8400027Control-Root23.459

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved