Gene detail information of Glyur001179s00026671.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G61890.12.00E-16Integrase-type DNA-binding superfamily protein
NRXP_003602747.14.10E-63Ethylene-responsive transcription factor RAP2-6 [Medicago truncatula]
Swissprottr|Q9FH54|EF114_ARATH1.00E-42Ethylene-responsive transcription factor ERF114
trEMBLtr|G7J397|G7J397_MEDTR2.00E-63AP2 domain class transcription factor {ECO:0000313|EMBL:AES72998.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011791833120100+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001179s00026671.1PF00847.15AP2881272.90E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.589
SRR1783600control0.642
SRR1783602moderate drought stress0.501
SRR1811619moderate drought stress0.533

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.481
DRR006520Root Summer glycyrrhizin high producing strain0.477
DRR006521Root Winter glycyrrhizin high producing strain0.322
DRR006522Root Winter glycyrrhizin high producing strain0.360
DRR006523Root Summer glycyrrhizin low producing strain0.200
DRR006524Root Summer glycyrrhizin low producing strain0.245
DRR006525Leaf Summer glycyrrhizin high producing strain0.615
DRR006526Leaf Summer glycyrrhizin high producing strain0.615

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.860
SRR2868004Drought Stress(Tissue:root)2.792
SRR2967015Control (Tissue:root)1.042

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.942
SRR9715740Leave6.162
SRR9715741Leave4.366
SRR9715739Root0.465
SRR9715742Root0.099
SRR9715743Root0.412

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h30.478
SRR8749028MeJA induced 9h110.472
SRR8749029MeJA induced 9h19.868
SRR8749030Uninduced56.116
SRR8749031Uninduced8.956
SRR8749032Uninduced8.703

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.517
SRR8400027Control-Root1.449

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved