Gene detail information of Glyur001180s00029552.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G18390.21.00E-105Protein kinase superfamily protein
NRXP_004512900.10PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X2 [Cicer arietinum]
COGYP_002763346.12.00E-22putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|P0C5E2|Y1839_ARATH0Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBLtr|A0A072UB44|A0A072UB44_MEDTR0Wall-associated kinase-like protein {ECO:0000313|EMBL:KEH27004.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011803355936492+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001180s00029552.1PF14380.1WAK_assoc1572503.50E-15
Glyur001180s00029552.1PF00069.20Pkinase3305803.10E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.047
SRR1783600control23.482
SRR1783602moderate drought stress11.900
SRR1811619moderate drought stress11.810

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.121
DRR006520Root Summer glycyrrhizin high producing strain14.671
DRR006521Root Winter glycyrrhizin high producing strain62.028
DRR006522Root Winter glycyrrhizin high producing strain61.438
DRR006523Root Summer glycyrrhizin low producing strain67.064
DRR006524Root Summer glycyrrhizin low producing strain67.680
DRR006525Leaf Summer glycyrrhizin high producing strain37.467
DRR006526Leaf Summer glycyrrhizin high producing strain37.356

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.197
SRR2868004Drought Stress(Tissue:root)45.318
SRR2967015Control (Tissue:root)36.412

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave124.255
SRR9715740Leave100.169
SRR9715741Leave156.907
SRR9715739Root31.745
SRR9715742Root63.704
SRR9715743Root60.636

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h197.678
SRR8749028MeJA induced 9h139.501
SRR8749029MeJA induced 9h190.533
SRR8749030Uninduced62.485
SRR8749031Uninduced33.893
SRR8749032Uninduced44.568

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.680
SRR8400027Control-Root42.511

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved