Gene detail information of Glyur001180s00029553.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66920.22.00E-106Protein kinase superfamily protein
NRXP_006583413.10PREDICTED: probable receptor-like protein kinase At1g67000-like isoform X1 [Glycine max]
COGYP_001958461.14.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH2.00E-126Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|G7KMN1|G7KMN1_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES76644.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011803806943910-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001180s00029553.1PF00069.20Pkinase3175271.80E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.963
SRR1783600control0.767
SRR1783602moderate drought stress0.608
SRR1811619moderate drought stress0.672

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.680
DRR006520Root Summer glycyrrhizin high producing strain1.547
DRR006521Root Winter glycyrrhizin high producing strain0.458
DRR006522Root Winter glycyrrhizin high producing strain0.469
DRR006523Root Summer glycyrrhizin low producing strain1.729
DRR006524Root Summer glycyrrhizin low producing strain1.379
DRR006525Leaf Summer glycyrrhizin high producing strain0.252
DRR006526Leaf Summer glycyrrhizin high producing strain0.602

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.368
SRR2868004Drought Stress(Tissue:root)0.834
SRR2967015Control (Tissue:root)0.772

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.032
SRR9715740Leave8.164
SRR9715741Leave7.556
SRR9715739Root1.545
SRR9715742Root1.568
SRR9715743Root1.079

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.347
SRR8749028MeJA induced 9h5.897
SRR8749029MeJA induced 9h2.207
SRR8749030Uninduced12.959
SRR8749031Uninduced1.262
SRR8749032Uninduced1.508

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.320
SRR8400027Control-Root1.264

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved