Gene detail

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Gene detail information of Glyur001180s00029556.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G66920.1	8.00E-115	Protein kinase superfamily protein
NR	KHN20749.1	0	Putative receptor-like protein kinase [Glycine soja]
COG	YP_001958461.1	4.00E-24	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q3ECH2\|Y1670_ARATH	1.00E-125	Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBL	tr\|I1KIZ4\|I1KIZ4_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G10460.1}

Sequence

Transcript Sequence

>Glyur001180s00029556.1
ATGATCAACTCATTCAAAGATAAACTGGGTCAAGGTGGTTTTGGTGCTGTATACAAAATAAAGTTGCCTCATGGTAGCCTTGTGGCTGTAAAGATATTGAAGACAGCCAAAGGAAATGGTGAACATTTCATCAATGAGGTTGTTAGCATTAGTAGAACCTCACACGTTAATGTTGTCAACCTTGTTGGATTTTGTTTCGAAGGCGACAAAAAAGCTCTCATCAATGAATTTACGTCCAATGTTCGAGGGTTGGAGTATTTGCATAGGGGATGTAATACTCAGATTTTACATTTTGACATAAAACCATATAACACTCTTTTGGATGAGAGTTTCTGCCCAATGATATCAGATTTGGGCTTGCAAAGCTTTGTCCCAGGAAAGAGAGCATTGTATCCATGTCAGATGCCAAAGGGACACTTGGAAATGGTGGGAGCGAGGAAAAATGTTAATGCTGAAGCCAATCACACAAGTGAGACATACTTTCGTCACTGGGTATACAGCAGGCTTGAGCTAGGTAGTGATTTGAGACCTAATGGGGAGAATATGACCATTGTGGGATTATGGTGCATTCAAACGCTTCCAAATGATAGGCCTACAATGAGTGGAGTGATTGATATAATGGATGACCATATCCATGCCCCCATGCTCTCTACATCCATGCTCACCACCACCACCATCATCATCATCTCTTTGTGCTTGTTATTAACCACTTTGCCACAATCCCACGGTCAGTTACCACCACCTGAACAATCCCCTCGCAATTATTCGATTTGTAGGGAACAGTCCTACTCCTACAGTTGCGGGAACCTGTCCAACATCTTCTATCCATTCTGGGGTGGAAACAACCGACCCGAATACTGTGGCGGCGGCGACCTATTCCAACTCCACTGCCACGGTGGCCAAAACACTACCATTCTAATCGGATCACAAGAGTTCACAGTAATGGATATTGACCCCGAAAAATACACCATGAGGTTGAAGCGAACAGACCTTGCTCAGGATGTTTGTTCCCAGCAATTTGACGAAGATGCTAGTCAATATTTTAATGGCAGTGGTGATCTGTTCAGTTATGGTCCAAAAGTGTACAAACTCACCATATCCTACGACTGTCCCCCTGGATCAAAGTACTTCTCCAATAGGAAATCCATATACTCTTTTATTTGTGGAGATGAGGATGTCTTCTATTCCGTGGATGAAAAACTAGGCCTAGCCTGCCAGCGACACACAATGGTGCCGACGGACACTCCTCTGACGTCTTACACCTTGGGTGAGTCGAATACCATCACGGCAGTTATTGATGCGGGGTTTGAGGTGGAGTATACTGTAAATGAGGATTGTGGGAGATGCCTGGGAGGAACAAGAAGTGATCATGGAGATTGCTGGAACAGTGGTGATGATGCTGTTATTGAGCAACATATACAACGTTCCTGCTATTATTCTTATTGCCCCGATGGATCTGCTACCACCACACAATGTTCTGCTCATCACAAAAATACATATTGTCATAAGAAAGCTCTCATCTATGAATTTATGCCCAATGGTTCCCTCGACAAATTTATTTACAACAAGGGACCCGAAACCATTGCATCACTGAGCTGGGAGAATCTGTATAAAATTGCCAAAGAGATAGCTCGAGGGCTGGAGTACTTGCATAGGGGATGTAACACTCAGATCTTGCATTTTGACATAAAACCACATAACATTNTTCTAGATGAGAATTTCAGTCCAAAGATATCAGATTTTGGGCTTGCAAAGCTTTGTCTCAGGAAAGAGAGCAGTGTTTCCATGTCAGATGCCAGAGGGACAATGGGGTATGTAGCTCCAGANGTGTGGAATAGACATTTTGGAGGAGTCTCACACAAGTCTGANGTTTATAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGCAAGGAAAAACATTAATGCTGAAGCCAGTCACACAAGTGAGATATACTTTCCTCATTGGGTGTACAGCAGGCTTGAGCTAGNTAGTGATTTAAGACCTGATGTGGTGATGGCCANACAAGAAAATGAGATTGCCAGGAGAATGACCATTGTGGGATTATGGTGCATTCAAACGNTTCCAAATGATAGGCCTGCAATGAGTAGAGTGATTGATATAATAATGGATAACCATATCCCCTTACACCTCACAATCTCATTCTTCTTTTTCTTCTTCTTCATAATCACAACCACTTTACCACAACTCCAAGGAGAAGAAGATACNACCAAATACTCAGTGTGTAGAAGGCCATACAGTTGTGGTGACGTGTCCAACATCTCCTACCCTTTCTGGGGACAGAACCGACCTTCTTACTGTGCTAGCACTGAGCAGTTACTCCTCAACTGTCACCCCAACGACCTCCTAACCACCTCGTTCCAATTCGATTCGCAGAACTTCACGGTGCTGCGGATCNACACGTTATCCGAAACCATGAGATTGGTCCGAACAGACATTGTGTACGATGATTGTTCCTCCTCGGATTTGACCAACACCTCGTTGGACCCAGCAATCTTCGAGTTCCCCGATACCGGACACAACATCACCGTGTTCTATAACTGTCCAACGGGTTTCACGGATGACAGGACACAACACAGTTTCTATGCTAAGATGACAGAGGAATTGTTGCAGAGGTTTCCAGAGTTAGAGTCGTGTGCGCTTCGTGTTCATGTTCCGGTTTTGGGAGAGGTTGTTTTGGAGGGTAATGGGGGCATCGATTCCCTAACACGAGCTGCTTCACGTGGGTTTGATGTGTTCTATAATGTTGCACACGATCAGGAATGTGACGGTTGCAAGGGAAGTAATGGAGTTTGTGGGACCAATGATGTTGCTGCTAATGCTGAGGGTCGGTTTTCTTGTTTTTGCCAGGATGGTTATGAAGGTGTTACAAGTGCAGCAATTGCAGGATTGTTGATATGTATCACAATTTACTATTCTAGATACAGGTCATCAACATGGAAAGCACATTTTGGGTTGAAGNCAAAAAATAACCAACATATTGAAGCATTCTTAAGAAATCATGGAGCTCTAACTTTGAAAAGATATAAATTATCAGATGTCAAGAAAATGACTAACTCTCTCGAAGTNAAACTGGGACAAGGTGGTTTTGGTGCTGTATACAAAGGAAAGTTGTCCAATGGTTCTCATGTGGCTGTAAAGATACTGAATGTATCCAAAAGAAATGATGAAGAATTCATCAATGAGGTTGCAAGCATCAGTAGAACTTCTCATGTTAATGTTGTGGCTCTTCTTGGTTTCTGTTTGGAAGGCTCCAAGAAAGCTCTCGTCTATGAATTTATGCCTAATGGTTCCCTTGAAAAGTTCATTCACATGAAGGGGCCTGAAACNAGTAATCCACCCTTGAGTTGGGATATTTTGTATCAAATCGCAATCGGCATAGCTCGAGGGCTAGAGTACTTGCATAGGGGATGTAATACTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTGGATGAGAGTTTCTGCCCTAAGATATCGGATTTTGGGCTTGCAAAGCTTTGTCCCAGGAAAGAGAGCATTATTTCCATGTCAGATGCTAGAGGAACAATGGGNTATGTAGCTCCAGAAGTGNTGAATAGACACTTTGCCGGAGTTTCACACAAGTCTGATGTATATAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGGGAGGAGGAACATTAATGGTGAAGCCAGTCACACTAGTGAGATATACTTCCCACATTGGGCATACAAAAGGCTTGAGCAAGGTACTNAATTGAGACCAAATGAGGTGATGACAACAGAAGAAAATGAGATTGCAAAGAGAATGACCATTGTGGGTTTATGGTGCATTCAAACATTCCCAAACCATAGGCCTACAATGAGTAGAGTTATTGAAATGTTGGAAGGCAACATGAATTCCTTGGAAATACCACCAAAACCTATACTTTCTTCTCCTACTAGATCAGCACCAGAATCTTCCACTTCATGA

Protein Sequence

>Glyur001180s00029556.1
MINSFKDKLGQGGFGAVYKIKLPHGSLVAVKILKTAKGNGEHFINEVVSISRTSHVNVVNLVGFCFEGDKKALINEFTSNVRGLEYLHRGCNTQILHFDIKPYNTLLDESFCPMISDLGLQSFVPGKRALYPCQMPKGHLEMVGARKNVNAEANHTSETYFRHWVYSRLELGSDLRPNGENMTIVGLWCIQTLPNDRPTMSGVIDIMDDHIHAPMLSTSMLTTTTIIIISLCLLLTTLPQSHGQLPPPEQSPRNYSICREQSYSYSCGNLSNIFYPFWGGNNRPEYCGGGDLFQLHCHGGQNTTILIGSQEFTVMDIDPEKYTMRLKRTDLAQDVCSQQFDEDASQYFNGSGDLFSYGPKVYKLTISYDCPPGSKYFSNRKSIYSFICGDEDVFYSVDEKLGLACQRHTMVPTDTPLTSYTLGESNTITAVIDAGFEVEYTVNEDCGRCLGGTRSDHGDCWNSGDDAVIEQHIQRSCYYSYCPDGSATTTQCSAHHKNTYCHKKALIYEFMPNGSLDKFIYNKGPETIASLSWENLYKIAKEIARGLEYLHRGCNTQILHFDIKPHNIXLDENFSPKISDFGLAKLCLRKESSVSMSDARGTMGYVAPXVWNRHFGGVSHKSXVYSYGMMLLEMVGARKNINAEASHTSEIYFPHWVYSRLELXSDLRPDVVMAXQENEIARRMTIVGLWCIQTXPNDRPAMSRVIDIIMDNHIPLHLTISFFFFFFFIITTTLPQLQGEEDTTKYSVCRRPYSCGDVSNISYPFWGQNRPSYCASTEQLLLNCHPNDLLTTSFQFDSQNFTVLRIXTLSETMRLVRTDIVYDDCSSSDLTNTSLDPAIFEFPDTGHNITVFYNCPTGFTDDRTQHSFYAKMTEELLQRFPELESCALRVHVPVLGEVVLEGNGGIDSLTRAASRGFDVFYNVAHDQECDGCKGSNGVCGTNDVAANAEGRFSCFCQDGYEGVTSAAIAGLLICITIYYSRYRSSTWKAHFGLKXKNNQHIEAFLRNHGALTLKRYKLSDVKKMTNSLEVKLGQGGFGAVYKGKLSNGSHVAVKILNVSKRNDEEFINEVASISRTSHVNVVALLGFCLEGSKKALVYEFMPNGSLEKFIHMKGPETSNPPLSWDILYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDESFCPKISDFGLAKLCPRKESIISMSDARGTMGYVAPEVXNRHFAGVSHKSDVYSYGMMLLEMVGGRRNINGEASHTSEIYFPHWAYKRLEQGTXLRPNEVMTTEENEIAKRMTIVGLWCIQTFPNHRPTMSRVIEMLEGNMNSLEIPPKPILSSPTRSAPESSTS

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01180	46127	65489	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001180s00029556.1	PF07714.12	Pkinase_Tyr	5	89	1.70E-10
Glyur001180s00029556.1	PF14380.1	WAK_assoc	392	478	0.0001
Glyur001180s00029556.1	PF00069.20	Pkinase	501	654	3.40E-28
Glyur001180s00029556.1	PF14380.1	WAK_assoc	881	959	5.60E-12
Glyur001180s00029556.1	PF00069.20	Pkinase	1030	1297	6.40E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.269
SRR1783600	control	0.283
SRR1783602	moderate drought stress	0.112
SRR1811619	moderate drought stress	0.116

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.241
DRR006520	Root Summer glycyrrhizin high producing strain	0.233
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.498
DRR006524	Root Summer glycyrrhizin low producing strain	0.452
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.361
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.376

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.190
SRR2868004	Drought Stress(Tissue:root)	0.115
SRR2967015	Control (Tissue:root)	0.169

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.377
SRR9715740	Leave	0.451
SRR9715741	Leave	0.548
SRR9715739	Root	0.216
SRR9715742	Root	0.217
SRR9715743	Root	0.045

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.487
SRR8749028	MeJA induced 9h	0.067
SRR8749029	MeJA induced 9h	0.291
SRR8749030	Uninduced	0.526
SRR8749031	Uninduced	0.204
SRR8749032	Uninduced	0.299

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.029
SRR8400027	Control-Root	0.113