Gene detail information of Glyur001181s00045996.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26870.16.00E-26non-specific phospholipase C2
NRKEH33501.11.97E-50non-specific phospholipase C4 [Medicago truncatula]
Swissprottr|O81020|NPC2_ARATH7.00E-30Non-specific phospholipase C2 (Precursor)
trEMBLtr|A0A072UVR5|A0A072UVR5_MEDTR7.00E-51Non-specific phospholipase C4 {ECO:0000313|EMBL:KEH33501.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011817429974677+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01114plcC EC:3.1.4.3 Inositol phosphate metabolism map00562
Glycerophospholipid metabolismmap00564
Ether lipid metabolismmap00565
Quorum sensingmap02024
Thyroid hormone signaling pathwaymap04919


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.816
SRR1783600control1.621
SRR1783602moderate drought stress2.170
SRR1811619moderate drought stress1.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.771
DRR006520Root Summer glycyrrhizin high producing strain7.979
DRR006521Root Winter glycyrrhizin high producing strain0.510
DRR006522Root Winter glycyrrhizin high producing strain2.302
DRR006523Root Summer glycyrrhizin low producing strain11.901
DRR006524Root Summer glycyrrhizin low producing strain12.263
DRR006525Leaf Summer glycyrrhizin high producing strain5.658
DRR006526Leaf Summer glycyrrhizin high producing strain5.576

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.531
SRR2868004Drought Stress(Tissue:root)1.827
SRR2967015Control (Tissue:root)3.282

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.857
SRR9715740Leave10.984
SRR9715741Leave6.013
SRR9715739Root0.078
SRR9715742Root2.072
SRR9715743Root4.091

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.879
SRR8749028MeJA induced 9h20.170
SRR8749029MeJA induced 9h9.814
SRR8749030Uninduced1.877
SRR8749031Uninduced0.694
SRR8749032Uninduced0.880

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.370
SRR8400027Control-Root1.815