Gene detail information of Glyur001181s00045996.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT2G26870.1 | 6.00E-26 | non-specific phospholipase C2 |
NR | KEH33501.1 | 1.97E-50 | non-specific phospholipase C4 [Medicago truncatula] |
Swissprot | tr|O81020|NPC2_ARATH | 7.00E-30 | Non-specific phospholipase C2 (Precursor) |
trEMBL | tr|A0A072UVR5|A0A072UVR5_MEDTR | 7.00E-51 | Non-specific phospholipase C4 {ECO:0000313|EMBL:KEH33501.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold01181 | 74299 | 74677 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
Gene OntologyNot hits found. |
Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
-- | -- | -- | -- | -- |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 1.816 |
SRR1783600 | control | 1.621 |
SRR1783602 | moderate drought stress | 2.170 |
SRR1811619 | moderate drought stress | 1.161 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 10.771 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 7.979 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.510 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 2.302 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 11.901 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 12.263 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.658 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.576 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.531 |
SRR2868004 | Drought Stress(Tissue:root) | 1.827 |
SRR2967015 | Control (Tissue:root) | 3.282 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 7.857 |
SRR9715740 | Leave | 10.984 |
SRR9715741 | Leave | 6.013 |
SRR9715739 | Root | 0.078 |
SRR9715742 | Root | 2.072 |
SRR9715743 | Root | 4.091 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 4.879 |
SRR8749028 | MeJA induced 9h | 20.170 |
SRR8749029 | MeJA induced 9h | 9.814 |
SRR8749030 | Uninduced | 1.877 |
SRR8749031 | Uninduced | 0.694 |
SRR8749032 | Uninduced | 0.880 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 2.370 |
SRR8400027 | Control-Root | 1.815 |