Gene detail information of Glyur001183s00030460.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21400.1 | 4.00E-42 | cysteine-rich RLK (RECEPTOR-like protein kinase) 28 |
| NR | XP_006606897.1 | 8.48E-137 | PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] |
| Swissprot | tr|Q9T0J1|CRK26_ARATH | 2.00E-52 | Cysteine-rich receptor-like protein kinase 26 (Precursor) |
| trEMBL | tr|I1NG61|I1NG61_SOYBN | 3.00E-136 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G27440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01183 | 4731 | 11536 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.7.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001183s00030460.1 | PF01657.12 | Stress-antifung | 27 | 123 | 5.00E-21 |
| Glyur001183s00030460.1 | PF07714.12 | Pkinase_Tyr | 334 | 370 | 6.40E-05 |
| Glyur001183s00030460.1 | PF01657.12 | Stress-antifung | 447 | 547 | 5.50E-20 |
| Glyur001183s00030460.1 | PF01657.12 | Stress-antifung | 560 | 650 | 1.40E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.150 |
| SRR1783600 | control | 1.916 |
| SRR1783602 | moderate drought stress | 1.015 |
| SRR1811619 | moderate drought stress | 0.942 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.890 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.809 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.054 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.040 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.160 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.616 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.788 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.365 |
| SRR2967015 | Control (Tissue:root) | 4.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.394 |
| SRR9715740 | Leave | 1.106 |
| SRR9715741 | Leave | 2.372 |
| SRR9715739 | Root | 0.012 |
| SRR9715742 | Root | 1.021 |
| SRR9715743 | Root | 0.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.068 |
| SRR8749028 | MeJA induced 9h | 0.022 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.182 |
| SRR8749031 | Uninduced | 0.060 |
| SRR8749032 | Uninduced | 0.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.108 |
| SRR8400027 | Control-Root | 1.149 |