Gene detail information of Glyur001183s00030463.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23140.21.00E-32cysteine-rich RLK (RECEPTOR-like protein kinase) 6
NRXP_003637965.11.03E-109Cysteine-rich receptor-like protein kinase [Medicago truncatula]
Swissprottr|Q9M0X5|CRK25_ARATH2.00E-48Cysteine-rich receptor-like protein kinase 25 (Precursor)
trEMBLtr|G8A0W5|G8A0W5_MEDTR4.00E-110Cysteine-rich receptor-like protein kinase {ECO:0000313|EMBL:AES85103.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011832312926018-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001183s00030463.1PF01657.12Stress-antifung351335.70E-26
Glyur001183s00030463.1PF01657.12Stress-antifung1602581.60E-18
Glyur001183s00030463.1PF07714.12Pkinase_Tyr2954022.60E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.053
SRR1783600control0.053
SRR1783602moderate drought stress0.186
SRR1811619moderate drought stress0.190

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.317
DRR006520Root Summer glycyrrhizin high producing strain0.321
DRR006521Root Winter glycyrrhizin high producing strain0.452
DRR006522Root Winter glycyrrhizin high producing strain0.510
DRR006523Root Summer glycyrrhizin low producing strain0.346
DRR006524Root Summer glycyrrhizin low producing strain0.405
DRR006525Leaf Summer glycyrrhizin high producing strain2.900
DRR006526Leaf Summer glycyrrhizin high producing strain2.898

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.511
SRR2868004Drought Stress(Tissue:root)11.892
SRR2967015Control (Tissue:root)6.339

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.665
SRR9715740Leave0.185
SRR9715741Leave1.439
SRR9715739Root0.000
SRR9715742Root0.356
SRR9715743Root0.136

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.052
SRR8749028MeJA induced 9h0.295
SRR8749029MeJA induced 9h0.505
SRR8749030Uninduced0.808
SRR8749031Uninduced2.185
SRR8749032Uninduced0.919

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.844
SRR8400027Control-Root2.852

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved