Gene detail information of Glyur001183s00030464.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00970.17.00E-47cysteine-rich RLK (RECEPTOR-like protein kinase) 41
NRCBI38478.34.82E-108unnamed protein product [Vitis vinifera]
COGYP_004696643.11.00E-08serine/threonine protein kinase [Nitrosomonas sp. Is79A3]
Swissprottr|O23081|CRK41_ARATH8.00E-52Cysteine-rich receptor-like protein kinase 41 (Precursor)
trEMBLtr|F6I2E2|F6I2E2_VITVI8.00E-119Putative uncharacterized protein {ECO:0000313|EMBL:CCB61109.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011832605931350-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001183s00030464.1PF01657.12Stress-antifung361362.70E-20
Glyur001183s00030464.1PF01657.12Stress-antifung1592404.30E-14
Glyur001183s00030464.1PF00069.20Pkinase3093861.90E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.323
SRR1783600control0.288
SRR1783602moderate drought stress2.522
SRR1811619moderate drought stress2.296

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.131
DRR006520Root Summer glycyrrhizin high producing strain1.005
DRR006521Root Winter glycyrrhizin high producing strain1.852
DRR006522Root Winter glycyrrhizin high producing strain2.132
DRR006523Root Summer glycyrrhizin low producing strain1.024
DRR006524Root Summer glycyrrhizin low producing strain0.949
DRR006525Leaf Summer glycyrrhizin high producing strain75.921
DRR006526Leaf Summer glycyrrhizin high producing strain73.818

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.047
SRR2868004Drought Stress(Tissue:root)1.917
SRR2967015Control (Tissue:root)2.141

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.212
SRR9715740Leave21.447
SRR9715741Leave56.668
SRR9715739Root1.315
SRR9715742Root17.568
SRR9715743Root13.978

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.080
SRR8749028MeJA induced 9h0.002
SRR8749029MeJA induced 9h0.006
SRR8749030Uninduced0.010
SRR8749031Uninduced0.138
SRR8749032Uninduced0.137

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.018
SRR8400027Control-Root3.563

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved