Gene detail information of Glyur001183s00030465.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23180.11.00E-86cysteine-rich RLK (RECEPTOR-like protein kinase) 10
NRKCW75396.12.80E-174hypothetical protein EUGRSUZ_E04150 [Eucalyptus grandis]
COGYP_007201945.12.00E-15protein kinase family protein [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q8GYA4|CRK10_ARATH4.00E-99Cysteine-rich receptor-like protein kinase 10 (Precursor)
trEMBLtr|A0A061GN85|A0A061GN85_THECC0Cysteine-rich protein, putative isoform 1 {ECO:0000313|EMBL:EOY28569.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011834230246672-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001183s00030465.1PF01657.12Stress-antifung371351.50E-24
Glyur001183s00030465.1PF01657.12Stress-antifung1502483.60E-20
Glyur001183s00030465.1PF07714.12Pkinase_Tyr3275292.30E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.304
SRR1783600control3.251
SRR1783602moderate drought stress10.032
SRR1811619moderate drought stress9.997

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.076
DRR006520Root Summer glycyrrhizin high producing strain8.022
DRR006521Root Winter glycyrrhizin high producing strain17.729
DRR006522Root Winter glycyrrhizin high producing strain17.087
DRR006523Root Summer glycyrrhizin low producing strain10.220
DRR006524Root Summer glycyrrhizin low producing strain9.960
DRR006525Leaf Summer glycyrrhizin high producing strain19.905
DRR006526Leaf Summer glycyrrhizin high producing strain19.734

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.977
SRR2868004Drought Stress(Tissue:root)20.401
SRR2967015Control (Tissue:root)30.250

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.241
SRR9715740Leave24.820
SRR9715741Leave23.496
SRR9715739Root2.968
SRR9715742Root5.798
SRR9715743Root5.007

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.374
SRR8749028MeJA induced 9h16.062
SRR8749029MeJA induced 9h5.521
SRR8749030Uninduced12.271
SRR8749031Uninduced11.567
SRR8749032Uninduced6.881

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.530
SRR8400027Control-Root7.268

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved