Gene detail information of Glyur001183s00030468.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23250.15.00E-72kinases;protein kinases
NRXP_010057984.11.54E-147PREDICTED: cysteine-rich receptor-like protein kinase 10 isoform X2 [Eucalyptus grandis]
COGYP_284821.15.00E-06protein kinase:GAF [Dechloromonas aromatica RCB]
Swissprottr|Q8GYA4|CRK10_ARATH2.00E-67Cysteine-rich receptor-like protein kinase 10 (Precursor)
trEMBLtr|V7BBD5|V7BBD5_PHAVU1.00E-135Uncharacterized protein {ECO:0000313|EMBL:ESW15182.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011835504771106-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004713  protein tyrosine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001183s00030468.1PF01657.12Stress-antifung361341.20E-24
Glyur001183s00030468.1PF01657.12Stress-antifung1632571.30E-17
Glyur001183s00030468.1PF01657.12Stress-antifung3654684.40E-29
Glyur001183s00030468.1PF01657.12Stress-antifung4835811.30E-19
Glyur001183s00030468.1PF00069.20Pkinase6486890.00011
Glyur001183s00030468.1PF07714.12Pkinase_Tyr7018051.70E-07
Glyur001183s00030468.1PF01657.12Stress-antifung8819861.20E-22
Glyur001183s00030468.1PF01657.12Stress-antifung100411032.20E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.999
SRR1783600control11.398
SRR1783602moderate drought stress8.131
SRR1811619moderate drought stress7.942

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.461
DRR006520Root Summer glycyrrhizin high producing strain3.631
DRR006521Root Winter glycyrrhizin high producing strain4.622
DRR006522Root Winter glycyrrhizin high producing strain4.592
DRR006523Root Summer glycyrrhizin low producing strain7.141
DRR006524Root Summer glycyrrhizin low producing strain7.576
DRR006525Leaf Summer glycyrrhizin high producing strain19.726
DRR006526Leaf Summer glycyrrhizin high producing strain19.148

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.892
SRR2868004Drought Stress(Tissue:root)1.105
SRR2967015Control (Tissue:root)0.811

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.958
SRR9715740Leave17.426
SRR9715741Leave16.683
SRR9715739Root2.595
SRR9715742Root4.485
SRR9715743Root3.706

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.117
SRR8749028MeJA induced 9h13.782
SRR8749029MeJA induced 9h8.038
SRR8749030Uninduced10.921
SRR8749031Uninduced12.481
SRR8749032Uninduced10.663

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.819
SRR8400027Control-Root6.076

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved