Gene detail information of Glyur001184s00030532.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23220.1 | 7.00E-21 | Integrase-type DNA-binding superfamily protein |
| NR | XP_007162535.1 | 1.15E-45 | hypothetical protein PHAVU_001G160100g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LTC5|ERF98_ARATH | 2.00E-41 | Ethylene-responsive transcription factor ERF098 |
| trEMBL | tr|V7CWM3|V7CWM3_PHAVU | 4.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:ESW34529.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01184 | 68364 | 68792 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001184s00030532.1 | PF00847.15 | AP2 | 19 | 69 | 9.50E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.160 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.178 |
| SRR1811619 | moderate drought stress | 0.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.520 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.508 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.277 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.258 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.539 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 2.047 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.309 |
| SRR2967015 | Control (Tissue:root) | 1.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.772 |
| SRR9715740 | Leave | 1.607 |
| SRR9715741 | Leave | 2.935 |
| SRR9715739 | Root | 6.064 |
| SRR9715742 | Root | 2.020 |
| SRR9715743 | Root | 2.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.182 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.223 |
| SRR8749032 | Uninduced | 0.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 25.431 |
| SRR8400027 | Control-Root | 1.423 |