Gene detail information of Glyur001193s00034829.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61220.1 | 3.00E-48 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_003627602.1 | 3.29E-83 | (+)-neomenthol dehydrogenase [Medicago truncatula] |
| COG | YP_008149897.1 | 1.00E-16 | hypothetical protein SCE1572_17400 [Sorangium cellulosum So0157-2] |
| Swissprot | tr|Q9M2E2|SDR1_ARATH | 8.00E-66 | (+)-neomenthol dehydrogenase |
| trEMBL | tr|G7LBU0|G7LBU0_MEDTR | 1.00E-83 | NAD(P)-binding rossmann-fold protein {ECO:0000313|EMBL:AET02078.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01193 | 15467 | 18092 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K15095 | E1.1.1.208 | EC:1.1.1.208 | Monoterpenoid biosynthesis | map00902 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.010 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.826 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.747 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.864 |
| SRR2967015 | Control (Tissue:root) | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 27.306 |
| SRR9715740 | Leave | 60.678 |
| SRR9715741 | Leave | 37.853 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.106 |
| SRR8400027 | Control-Root | 0.117 |