Gene detail information of Glyur001199s00031525.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13000.13.00E-55AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_004492258.18.73E-126PREDICTED: serine/threonine-protein kinase OXI1-like [Cicer arietinum]
COGYP_827085.15.00E-14serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q9LSF1|OXI1_ARATH2.00E-77Serine/threonine-protein kinase OXI1
trEMBLtr|V7B4H5|V7B4H5_PHAVU3.00E-114Uncharacterized protein {ECO:0000313|EMBL:ESW12699.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold011997270573541+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20714OXI1 EC:2.7.11.1 MAPK signaling pathway - plant map04016


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001199s00031525.1PF00069.20Pkinase821825.50E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.068
SRR1783600control0.975
SRR1783602moderate drought stress0.682
SRR1811619moderate drought stress0.712

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain48.935
DRR006520Root Summer glycyrrhizin high producing strain48.829
DRR006521Root Winter glycyrrhizin high producing strain0.267
DRR006522Root Winter glycyrrhizin high producing strain0.260
DRR006523Root Summer glycyrrhizin low producing strain41.797
DRR006524Root Summer glycyrrhizin low producing strain43.054
DRR006525Leaf Summer glycyrrhizin high producing strain3.990
DRR006526Leaf Summer glycyrrhizin high producing strain3.883

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.125
SRR2868004Drought Stress(Tissue:root)15.221
SRR2967015Control (Tissue:root)14.438

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave160.100
SRR9715740Leave44.966
SRR9715741Leave90.194
SRR9715739Root43.653
SRR9715742Root93.373
SRR9715743Root82.273

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h335.682
SRR8749028MeJA induced 9h256.494
SRR8749029MeJA induced 9h533.457
SRR8749030Uninduced761.229
SRR8749031Uninduced760.073
SRR8749032Uninduced508.684

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.930
SRR8400027Control-Root9.224

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved