Gene detail information of Glyur001203s00034515.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60400.1 | 4.00E-148 | Mitochondrial transcription termination factor family protein |
| NR | XP_004515380.1 | 0 | PREDICTED: uncharacterized protein LOC101499154 [Cicer arietinum] |
| trEMBL | tr|A0A072TKN3|A0A072TKN3_MEDTR | 0 | Transcription termination factor family protein {ECO:0000313|EMBL:KEH17771.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01203 | 65245 | 69242 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001203s00034515.1 | PF02536.9 | mTERF | 430 | 533 | 5.50E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.384 |
| SRR1783600 | control | 3.653 |
| SRR1783602 | moderate drought stress | 6.037 |
| SRR1811619 | moderate drought stress | 6.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.797 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.658 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.798 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.699 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.157 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.761 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.604 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.273 |
| SRR2868004 | Drought Stress(Tissue:root) | 5.968 |
| SRR2967015 | Control (Tissue:root) | 5.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.634 |
| SRR9715740 | Leave | 2.046 |
| SRR9715741 | Leave | 1.673 |
| SRR9715739 | Root | 0.355 |
| SRR9715742 | Root | 1.978 |
| SRR9715743 | Root | 1.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.761 |
| SRR8749028 | MeJA induced 9h | 2.099 |
| SRR8749029 | MeJA induced 9h | 0.731 |
| SRR8749030 | Uninduced | 0.455 |
| SRR8749031 | Uninduced | 0.319 |
| SRR8749032 | Uninduced | 0.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.053 |
| SRR8400027 | Control-Root | 9.479 |