Gene detail information of Glyur001205s00030675.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G10370.10FAD-dependent oxidoreductase family protein
NRXP_007145519.10hypothetical protein PHAVU_007G245200g [Phaseolus vulgaris]
COGYP_004367519.11.00E-156glycerol-3-phosphate dehydrogenase [Marinithermus hydrothermalis DSM 14884]
Swissprottr|Q9SS48|SDP6_ARATH0Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial (Precursor)
trEMBLtr|V7BKF3|V7BKF3_PHAVU0Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012051216816430-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00111glpA, glpD EC:1.1.5.3 Glycerophospholipid metabolism map00564


Gene Ontology

biological_process

GO:0006072  glycerol-3-phosphate metabolic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0009331  glycerol-3-phosphate dehydrogenase complex


molecular_function

GO:0004368  glycerol-3-phosphate dehydrogenase activity

GO:0016491  oxidoreductase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001205s00030675.1PF01266.19DAO724343.40E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.317
SRR1783600control27.350
SRR1783602moderate drought stress20.444
SRR1811619moderate drought stress19.979

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.704
DRR006520Root Summer glycyrrhizin high producing strain24.529
DRR006521Root Winter glycyrrhizin high producing strain24.853
DRR006522Root Winter glycyrrhizin high producing strain24.137
DRR006523Root Summer glycyrrhizin low producing strain17.066
DRR006524Root Summer glycyrrhizin low producing strain17.311
DRR006525Leaf Summer glycyrrhizin high producing strain17.753
DRR006526Leaf Summer glycyrrhizin high producing strain17.577

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.684
SRR2868004Drought Stress(Tissue:root)35.571
SRR2967015Control (Tissue:root)33.706

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.528
SRR9715740Leave13.884
SRR9715741Leave22.393
SRR9715739Root27.642
SRR9715742Root27.713
SRR9715743Root27.194

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.939
SRR8749028MeJA induced 9h33.742
SRR8749029MeJA induced 9h21.548
SRR8749030Uninduced24.905
SRR8749031Uninduced24.540
SRR8749032Uninduced23.377

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.068
SRR8400027Control-Root31.347

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved