Gene detail information of Glyur001205s00030677.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G03730.20Protein kinase superfamily protein
NRAES60509.20MAP kinase kinase kinase-like protein [Medicago truncatula]
COGYP_001958461.12.00E-38hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q05609|CTR1_ARATH0Serine/threonine-protein kinase CTR1
trEMBLtr|G7I7V3|G7I7V3_MEDTR0MAP kinase kinase kinase-like protein {ECO:0000313|EMBL:AES60509.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012052200434374-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14510CTR1 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001205s00030677.1PF14381.1EDR1922931.90E-62
Glyur001205s00030677.1PF07714.12Pkinase_Tyr4176703.10E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.539
SRR1783600control18.706
SRR1783602moderate drought stress18.306
SRR1811619moderate drought stress18.243

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.384
DRR006520Root Summer glycyrrhizin high producing strain20.249
DRR006521Root Winter glycyrrhizin high producing strain46.548
DRR006522Root Winter glycyrrhizin high producing strain44.990
DRR006523Root Summer glycyrrhizin low producing strain16.851
DRR006524Root Summer glycyrrhizin low producing strain17.512
DRR006525Leaf Summer glycyrrhizin high producing strain40.782
DRR006526Leaf Summer glycyrrhizin high producing strain40.673

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.213
SRR2868004Drought Stress(Tissue:root)34.450
SRR2967015Control (Tissue:root)36.732

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.887
SRR9715740Leave34.908
SRR9715741Leave34.156
SRR9715739Root5.783
SRR9715742Root16.345
SRR9715743Root16.562

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.035
SRR8749028MeJA induced 9h20.032
SRR8749029MeJA induced 9h9.892
SRR8749030Uninduced11.738
SRR8749031Uninduced9.509
SRR8749032Uninduced6.713

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.567
SRR8400027Control-Root33.635

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved