Gene detail information of Glyur001214s00026371.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78580.10trehalose-6-phosphate synthase
NRXP_003524218.10PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like [Glycine max]
COGYP_006545085.17.00E-152alpha,alpha-trehalose-phosphate synthase (UDP-forming) [Methanoculleus bourgensis MS2]
Swissprottr|Q9SYM4|TPS1_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1
trEMBLtr|K7KQK7|K7KQK7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G29651.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012142511632738-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT20


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16055TPS EC:2.4.1.15 3.1.3.12 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005992  trehalose biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0003825  alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001214s00026371.1PF00982.16Glyco_transf_20975581.90E-186
Glyur001214s00026371.1PF02358.11Trehalose_PPase6178142.50E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.258
SRR1783600control0.251
SRR1783602moderate drought stress0.022
SRR1811619moderate drought stress0.041

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.166
DRR006520Root Summer glycyrrhizin high producing strain0.170
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.119
DRR006524Root Summer glycyrrhizin low producing strain0.118
DRR006525Leaf Summer glycyrrhizin high producing strain0.287
DRR006526Leaf Summer glycyrrhizin high producing strain0.265

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.661
SRR2868004Drought Stress(Tissue:root)0.489
SRR2967015Control (Tissue:root)0.448

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.308
SRR9715740Leave0.272
SRR9715741Leave0.093
SRR9715739Root0.000
SRR9715742Root0.022
SRR9715743Root0.011

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.574
SRR8749028MeJA induced 9h0.047
SRR8749029MeJA induced 9h0.074
SRR8749030Uninduced0.042
SRR8749031Uninduced0.019
SRR8749032Uninduced0.203

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.237
SRR8400027Control-Root0.199

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved