Gene detail information of Glyur001218s00032872.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17180.1 | 5.00E-71 | glutathione S-transferase TAU 25 |
| NR | XP_004510706.1 | 2.39E-132 | PREDICTED: probable glutathione S-transferase-like [Cicer arietinum] |
| COG | YP_007096787.1 | 2.00E-23 | glutathione S-transferase [Chamaesiphon minutus PCC 6605] |
| Swissprot | tr|P49332|GSTXC_TOBAC | 3.00E-101 | Probable glutathione S-transferase parC |
| trEMBL | tr|B7FGX6|B7FGX6_MEDTR | 4.00E-131 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84005.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01218 | 30669 | 31695 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001218s00032872.1 | PF02798.15 | GST_N | 15 | 75 | 2.50E-14 |
| Glyur001218s00032872.1 | PF00043.20 | GST_C | 115 | 193 | 1.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.092 |
| SRR1783600 | control | 3.100 |
| SRR1783602 | moderate drought stress | 0.531 |
| SRR1811619 | moderate drought stress | 0.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.556 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.296 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.607 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.263 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.118 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.464 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.648 |
| SRR2967015 | Control (Tissue:root) | 12.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.841 |
| SRR9715740 | Leave | 0.163 |
| SRR9715741 | Leave | 0.067 |
| SRR9715739 | Root | 3.972 |
| SRR9715742 | Root | 3.370 |
| SRR9715743 | Root | 2.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.484 |
| SRR8749028 | MeJA induced 9h | 0.068 |
| SRR8749029 | MeJA induced 9h | 0.426 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 24.221 |
| SRR8400027 | Control-Root | 27.174 |