Gene detail information of Glyur001221s00033773.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G18270.13.00E-78Arabidopsis NAC domain containing protein 87
NRXP_003554001.10PREDICTED: NAC domain-containing protein 100-like [Glycine max]
Swissprottr|Q9FLJ2|NC100_ARATH2.00E-93NAC domain-containing protein 100
trEMBLtr|K7MXS2|K7MXS2_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G28515.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012213633638489-


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001221s00033773.1PF02365.10NAM161451.80E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.570
SRR1783600control28.989
SRR1783602moderate drought stress28.453
SRR1811619moderate drought stress28.425

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.318
DRR006520Root Summer glycyrrhizin high producing strain59.954
DRR006521Root Winter glycyrrhizin high producing strain11.929
DRR006522Root Winter glycyrrhizin high producing strain11.502
DRR006523Root Summer glycyrrhizin low producing strain92.997
DRR006524Root Summer glycyrrhizin low producing strain93.656
DRR006525Leaf Summer glycyrrhizin high producing strain8.509
DRR006526Leaf Summer glycyrrhizin high producing strain8.642

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)58.513
SRR2868004Drought Stress(Tissue:root)115.183
SRR2967015Control (Tissue:root)98.038

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.479
SRR9715740Leave25.481
SRR9715741Leave31.670
SRR9715739Root8.065
SRR9715742Root30.974
SRR9715743Root24.372

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h731.659
SRR8749028MeJA induced 9h966.929
SRR8749029MeJA induced 9h1129.289
SRR8749030Uninduced668.342
SRR8749031Uninduced2044.074
SRR8749032Uninduced727.576

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.137
SRR8400027Control-Root53.050

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved