Gene detail information of Glyur001232s00031536.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01420.13.00E-96Peroxidase superfamily protein
NRXP_007151112.13.66E-141hypothetical protein PHAVU_004G018900g [Phaseolus vulgaris]
Swissprottr|Q9SGH6|DOX1_ARATH1.00E-115Alpha-dioxygenase 1 (Precursor)
trEMBLtr|V7C2I2|V7C2I2_PHAVU1.00E-141Uncharacterized protein {ECO:0000313|EMBL:ESW23106.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012327002872472+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10529DOX1 EC:1.-.-.- alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001232s00031536.1PF03098.10An_peroxidase952233.70E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.599
SRR1783600control19.374
SRR1783602moderate drought stress22.582
SRR1811619moderate drought stress22.277

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.396
DRR006520Root Summer glycyrrhizin high producing strain2.238
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.460
DRR006524Root Summer glycyrrhizin low producing strain0.461
DRR006525Leaf Summer glycyrrhizin high producing strain3.988
DRR006526Leaf Summer glycyrrhizin high producing strain3.733

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)72.150
SRR2868004Drought Stress(Tissue:root)192.201
SRR2967015Control (Tissue:root)210.254

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.125
SRR9715740Leave0.000
SRR9715741Leave9.621
SRR9715739Root2.991
SRR9715742Root30.684
SRR9715743Root25.709

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.795
SRR8749028MeJA induced 9h59.926
SRR8749029MeJA induced 9h14.149
SRR8749030Uninduced219.706
SRR8749031Uninduced593.224
SRR8749032Uninduced124.971

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root111.598
SRR8400027Control-Root61.345

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved