Gene detail information of Glyur001233s00029977.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30490.11.00E-131cinnamate-4-hydroxylase
NRAID51447.10cinnamate 4-hydroxylase 2 [Astragalus membranaceus]
COGYP_004303682.12.00E-23cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprottr|O24312|TCMO_POPTM0Trans-cinnamate 4-monooxygenase
trEMBLtr|A0A075EAV0|A0A075EAV0_ASTME0Cinnamate 4-hydroxylase 2 {ECO:0000313|EMBL:AID51447.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0123394110941+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP73A5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00487CYP73A EC:1.14.13.11 Degradation of aromatic compounds map01220
Phenylalanine metabolismmap00360
Ubiquinone and other terpenoid-quinone biosynthesismap00130
Phenylpropanoid biosynthesismap00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001233s00029977.1PF00067.17p4502034231.70E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.023
SRR1783602moderate drought stress0.072
SRR1811619moderate drought stress0.029

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.360
DRR006520Root Summer glycyrrhizin high producing strain0.347
DRR006521Root Winter glycyrrhizin high producing strain0.085
DRR006522Root Winter glycyrrhizin high producing strain0.083
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.143
DRR006526Leaf Summer glycyrrhizin high producing strain0.132

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.049
SRR2868004Drought Stress(Tissue:root)0.872
SRR2967015Control (Tissue:root)0.701

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.395
SRR9715740Leave0.071
SRR9715741Leave0.122
SRR9715739Root0.057
SRR9715742Root0.000
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.024
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.373
SRR8400027Control-Root0.283

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved