Gene detail information of Glyur001238s00031502.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G56400.1 | 4.00E-21 | WRKY DNA-binding protein 70 |
| NR | XP_003544262.1 | 1.76E-60 | PREDICTED: probable WRKY transcription factor 70-like [Glycine max] |
| Swissprot | tr|Q9LY00|WRK70_ARATH | 5.00E-39 | Probable WRKY transcription factor 70 |
| trEMBL | tr|K7M7W6|K7M7W6_SOYBN | 7.00E-61 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G36438.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01238 | 38513 | 49785 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001238s00031502.1 | PF03106.10 | WRKY | 142 | 183 | 5.90E-09 |
| Glyur001238s00031502.1 | PF03106.10 | WRKY | 430 | 488 | 1.30E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.311 |
| SRR1783600 | control | 1.162 |
| SRR1783602 | moderate drought stress | 1.498 |
| SRR1811619 | moderate drought stress | 1.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.055 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.885 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.174 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.455 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.860 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.974 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.595 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.249 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.288 |
| SRR2967015 | Control (Tissue:root) | 0.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.043 |
| SRR9715740 | Leave | 11.133 |
| SRR9715741 | Leave | 11.445 |
| SRR9715739 | Root | 0.079 |
| SRR9715742 | Root | 1.875 |
| SRR9715743 | Root | 1.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.111 |
| SRR8400027 | Control-Root | 0.063 |