Gene detail information of Glyur001242s00026108.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15080.13.00E-100Protein kinase superfamily protein
NRKDO82763.11.60E-140hypothetical protein CISIN_1g010432mg [Citrus sinensis]
COGYP_007107671.12.00E-14serine/threonine protein kinase [Geitlerinema sp. PCC 7407]
Swissprottr|Q9LFP7|Y5158_ARATH1.00E-121Probable receptor-like protein kinase At5g15080
trEMBLtr|A0A067GST2|A0A067GST2_CITSI6.00E-141Uncharacterized protein {ECO:0000313|EMBL:KDO82763.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012421940621051+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001242s00026108.1PF00069.20Pkinase101722.30E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control55.408
SRR1783600control57.143
SRR1783602moderate drought stress58.355
SRR1811619moderate drought stress59.207

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.693
DRR006520Root Summer glycyrrhizin high producing strain39.817
DRR006521Root Winter glycyrrhizin high producing strain64.392
DRR006522Root Winter glycyrrhizin high producing strain63.501
DRR006523Root Summer glycyrrhizin low producing strain43.837
DRR006524Root Summer glycyrrhizin low producing strain45.081
DRR006525Leaf Summer glycyrrhizin high producing strain21.060
DRR006526Leaf Summer glycyrrhizin high producing strain21.190

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.116
SRR2868004Drought Stress(Tissue:root)23.615
SRR2967015Control (Tissue:root)25.164

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.883
SRR9715740Leave19.346
SRR9715741Leave16.088
SRR9715739Root9.497
SRR9715742Root17.424
SRR9715743Root16.856

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h38.349
SRR8749028MeJA induced 9h24.396
SRR8749029MeJA induced 9h32.549
SRR8749030Uninduced13.273
SRR8749031Uninduced10.706
SRR8749032Uninduced10.485

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root25.215
SRR8400027Control-Root25.407

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved