Gene detail information of Glyur001243s00035886.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G69220.26.00E-78Protein kinase superfamily protein
NRXP_004490207.14.45E-129PREDICTED: serine/threonine-protein kinase dst1-like [Cicer arietinum]
COGYP_008737799.12.00E-11serine/threonine protein kinase [Actinoplanes friuliensis DSM 7358]
Swissprottr|Q5QN75|M2K1_ORYSJ3.00E-18Mitogen-activated protein kinase kinase 1
trEMBLtr|V7C892|V7C892_PHAVU6.00E-129Uncharacterized protein {ECO:0000313|EMBL:ESW25495.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012435546064607-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001243s00035886.1PF00069.20Pkinase751891.60E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.915
SRR1783600control12.096
SRR1783602moderate drought stress11.503
SRR1811619moderate drought stress11.067

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.273
DRR006520Root Summer glycyrrhizin high producing strain10.161
DRR006521Root Winter glycyrrhizin high producing strain6.563
DRR006522Root Winter glycyrrhizin high producing strain6.778
DRR006523Root Summer glycyrrhizin low producing strain10.163
DRR006524Root Summer glycyrrhizin low producing strain9.237
DRR006525Leaf Summer glycyrrhizin high producing strain8.664
DRR006526Leaf Summer glycyrrhizin high producing strain9.288

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.162
SRR2868004Drought Stress(Tissue:root)32.199
SRR2967015Control (Tissue:root)31.381

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.141
SRR9715740Leave11.734
SRR9715741Leave12.365
SRR9715739Root6.358
SRR9715742Root14.268
SRR9715743Root11.878

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.050
SRR8749028MeJA induced 9h20.993
SRR8749029MeJA induced 9h9.599
SRR8749030Uninduced5.464
SRR8749031Uninduced4.590
SRR8749032Uninduced6.595

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.836
SRR8400027Control-Root22.598

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved