Gene detail information of Glyur001248s00035957.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27930.1 | 7.00E-51 | PLATZ transcription factor family protein |
| NR | XP_004497560.1 | 3.21E-131 | PREDICTED: uncharacterized protein LOC101495331 [Cicer arietinum] |
| trEMBL | tr|I1L945|I1L945_SOYBN | 1.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G07240.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01248 | 13094 | 14842 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001248s00035957.1 | PF04640.9 | PLATZ | 65 | 136 | 7.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.331 |
| SRR1783600 | control | 2.176 |
| SRR1783602 | moderate drought stress | 1.560 |
| SRR1811619 | moderate drought stress | 1.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.046 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.201 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.754 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.436 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.209 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 18.069 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.352 |
| SRR2967015 | Control (Tissue:root) | 12.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.423 |
| SRR9715740 | Leave | 0.479 |
| SRR9715741 | Leave | 0.131 |
| SRR9715739 | Root | 0.742 |
| SRR9715742 | Root | 1.604 |
| SRR9715743 | Root | 0.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.549 |
| SRR8400027 | Control-Root | 7.043 |