Gene detail information of Glyur001251s00033104.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20690.13.00E-120Leucine-rich repeat protein kinase family protein
NRXP_004488098.10PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At5g20690-like [Cicer arietinum]
COGYP_004429344.11.00E-14leucine-rich repeat-containing protein [Krokinobacter sp. 4H-3-7-5]
Swissprottr|Q3E991|Y5269_ARATH0Probable inactive leucine-rich repeat receptor-like protein kinase At5g20690 (Precursor)
trEMBLtr|G7IIP0|G7IIP0_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES65591.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012512312627041+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001251s00033104.1PF08263.7LRRNT_223621.20E-09
Glyur001251s00033104.1PF13855.1LRR_81151736.80E-08
Glyur001251s00033104.1PF00069.20Pkinase3716361.20E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.335
SRR1783600control9.203
SRR1783602moderate drought stress11.809
SRR1811619moderate drought stress11.819

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.185
DRR006520Root Summer glycyrrhizin high producing strain5.961
DRR006521Root Winter glycyrrhizin high producing strain3.903
DRR006522Root Winter glycyrrhizin high producing strain3.804
DRR006523Root Summer glycyrrhizin low producing strain9.530
DRR006524Root Summer glycyrrhizin low producing strain9.458
DRR006525Leaf Summer glycyrrhizin high producing strain5.575
DRR006526Leaf Summer glycyrrhizin high producing strain5.422

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.272
SRR2868004Drought Stress(Tissue:root)10.730
SRR2967015Control (Tissue:root)10.836

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.817
SRR9715740Leave7.744
SRR9715741Leave7.162
SRR9715739Root2.346
SRR9715742Root4.233
SRR9715743Root4.271

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.953
SRR8749028MeJA induced 9h7.278
SRR8749029MeJA induced 9h5.906
SRR8749030Uninduced12.910
SRR8749031Uninduced14.285
SRR8749032Uninduced9.091

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.952
SRR8400027Control-Root9.514

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved