Gene detail information of Glyur001254s00028562.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G06520.1 | 6.00E-164 | glycerol-3-phosphate acyltransferase 1 |
| NR | XP_003545142.1 | 0 | PREDICTED: glycerol-3-phosphate acyltransferase 1-like [Glycine max] |
| Swissprot | tr|Q9SHJ5|GPAT1_ARATH | 0 | Glycerol-3-phosphate acyltransferase 1 |
| trEMBL | tr|I1M6X4|I1M6X4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01254 | 71303 | 73507 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13508 | GPAT | EC:2.3.1.15 | Glycerolipid metabolism | map00561 |
| Glycerophospholipid metabolism | map00564 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001254s00028562.1 | PF01553.16 | Acyltransferase | 333 | 434 | 1.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.643 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.077 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.030 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.762 |
| SRR9715740 | Leave | 2.201 |
| SRR9715741 | Leave | 0.988 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.730 |
| SRR9715743 | Root | 0.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.251 |
| SRR8400027 | Control-Root | 1.329 |