Gene detail information of Glyur001259s00024420.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G49570.18.00E-107Peroxidase superfamily protein
NRXP_004511960.10PREDICTED: peroxidase 10-like [Cicer arietinum]
Swissprottr|Q9FX85|PER10_ARATH9.00E-132Peroxidase 10 (Precursor)
trEMBLtr|G7K821|G7K821_MEDTR0Class III peroxidase {ECO:0000313|EMBL:AES94746.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012596372965730-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001259s00024420.1PF00141.18peroxidase472891.00E-74


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.075
SRR1783600control5.024
SRR1783602moderate drought stress1.469
SRR1811619moderate drought stress1.550

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.209
DRR006520Root Summer glycyrrhizin high producing strain0.207
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.084
DRR006524Root Summer glycyrrhizin low producing strain1.176
DRR006525Leaf Summer glycyrrhizin high producing strain0.089
DRR006526Leaf Summer glycyrrhizin high producing strain0.175

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)160.576
SRR2868004Drought Stress(Tissue:root)455.890
SRR2967015Control (Tissue:root)573.686

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.308
SRR9715740Leave0.122
SRR9715741Leave0.000
SRR9715739Root2.947
SRR9715742Root16.217
SRR9715743Root12.305

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.176
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced1.755
SRR8749031Uninduced0.139
SRR8749032Uninduced0.683

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.826
SRR8400027Control-Root17.454

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved