Gene detail information of Glyur001259s00024423.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66850.18.00E-147mitogen-activated protein kinase kinase kinase 5
NRXP_004511962.10PREDICTED: serine/threonine-protein kinase BCK1/SLK1/SSP31-like isoform X2 [Cicer arietinum]
COGYP_007162414.13.00E-25serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605]
Swissprottr|Q9CAD5|YODA_ARATH9.00E-112Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|G7K825|G7K825_MEDTR0MAP kinase kinase kinase {ECO:0000313|EMBL:AES94750.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012597088976177-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001259s00024423.1PF00069.20Pkinase3586196.70E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.700
SRR1783600control3.660
SRR1783602moderate drought stress3.158
SRR1811619moderate drought stress3.078

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.975
DRR006520Root Summer glycyrrhizin high producing strain4.143
DRR006521Root Winter glycyrrhizin high producing strain13.025
DRR006522Root Winter glycyrrhizin high producing strain12.564
DRR006523Root Summer glycyrrhizin low producing strain7.845
DRR006524Root Summer glycyrrhizin low producing strain7.513
DRR006525Leaf Summer glycyrrhizin high producing strain2.826
DRR006526Leaf Summer glycyrrhizin high producing strain2.818

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.864
SRR2868004Drought Stress(Tissue:root)8.020
SRR2967015Control (Tissue:root)7.405

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.179
SRR9715740Leave2.025
SRR9715741Leave1.116
SRR9715739Root0.375
SRR9715742Root2.096
SRR9715743Root1.843

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h17.019
SRR8749028MeJA induced 9h20.880
SRR8749029MeJA induced 9h16.020
SRR8749030Uninduced11.338
SRR8749031Uninduced12.560
SRR8749032Uninduced7.889

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.924
SRR8400027Control-Root2.663

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved