Gene detail information of Glyur001263s00024656.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G02880.31.00E-102thiamin pyrophosphokinase1
NRNP_001241238.12.83E-165uncharacterized protein LOC100795320 [Glycine max]
COGYP_001181117.14.00E-14thiamine pyrophosphokinase [Caldicellulosiruptor saccharolyticus DSM 8903]
Swissprottr|B9DGU7|TPK1_ARATH2.00E-128Thiamine pyrophosphokinase 1
trEMBLtr|K7KGB3|K7KGB3_SOYBN7.00E-166Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G37160.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012631946022309-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00949thiN, TPK1, THI80 EC:2.7.6.2 Thiamine metabolism map00730


Gene Ontology

biological_process

GO:0006772  thiamine metabolic process

GO:0009229  thiamine diphosphate biosynthetic process


molecular_function

GO:0004788  thiamine diphosphokinase activity

GO:0005524  ATP binding

GO:0030975  thiamine binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001263s00024656.1PF04263.11TPK_catalytic341711.60E-31
Glyur001263s00024656.1PF04265.9TPK_B1_binding1852514.00E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.319
SRR1783600control14.576
SRR1783602moderate drought stress13.881
SRR1811619moderate drought stress13.985

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.516
DRR006520Root Summer glycyrrhizin high producing strain9.647
DRR006521Root Winter glycyrrhizin high producing strain36.073
DRR006522Root Winter glycyrrhizin high producing strain35.233
DRR006523Root Summer glycyrrhizin low producing strain24.487
DRR006524Root Summer glycyrrhizin low producing strain24.306
DRR006525Leaf Summer glycyrrhizin high producing strain19.609
DRR006526Leaf Summer glycyrrhizin high producing strain19.165

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.483
SRR2868004Drought Stress(Tissue:root)45.797
SRR2967015Control (Tissue:root)41.084

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave50.256
SRR9715740Leave39.496
SRR9715741Leave47.081
SRR9715739Root14.017
SRR9715742Root21.683
SRR9715743Root19.903

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h34.401
SRR8749028MeJA induced 9h39.286
SRR8749029MeJA induced 9h45.135
SRR8749030Uninduced50.459
SRR8749031Uninduced58.846
SRR8749032Uninduced44.801

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.098
SRR8400027Control-Root29.690

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved