Gene detail information of Glyur001263s00024659.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G47760.19.00E-115asparagine-linked glycosylation 3
NRXP_003521559.10PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase-like [Glycine max]
Swissprottr|O82244|ALG3_ARATH2.00E-172Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
trEMBLtr|I1JQK9|I1JQK9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G37130.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012633038036112+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT58


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03845ALG3 EC:2.4.1.258 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

cellular_component

GO:0005783  endoplasmic reticulum

GO:0016021  integral component of membrane


molecular_function

GO:0016758  transferase activity, transferring hexosyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001263s00024659.2PF05208.8ALG3644021.90E-123


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.646
SRR1783600control11.831
SRR1783602moderate drought stress14.016
SRR1811619moderate drought stress13.904

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.770
DRR006520Root Summer glycyrrhizin high producing strain13.748
DRR006521Root Winter glycyrrhizin high producing strain18.701
DRR006522Root Winter glycyrrhizin high producing strain18.204
DRR006523Root Summer glycyrrhizin low producing strain13.862
DRR006524Root Summer glycyrrhizin low producing strain13.741
DRR006525Leaf Summer glycyrrhizin high producing strain9.790
DRR006526Leaf Summer glycyrrhizin high producing strain10.173

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.965
SRR2868004Drought Stress(Tissue:root)25.723
SRR2967015Control (Tissue:root)26.330

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.378
SRR9715740Leave13.415
SRR9715741Leave17.476
SRR9715739Root6.172
SRR9715742Root13.020
SRR9715743Root10.647

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.073
SRR8749028MeJA induced 9h9.610
SRR8749029MeJA induced 9h8.603
SRR8749030Uninduced7.894
SRR8749031Uninduced8.515
SRR8749032Uninduced9.244

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.499
SRR8400027Control-Root28.178

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved