Gene detail information of Glyur001263s00024665.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G27490.22.00E-85dephospho-CoA kinase family
NRXP_004494358.12.85E-147PREDICTED: dephospho-CoA kinase-like [Cicer arietinum]
COGNP_470934.18.00E-54dephospho-CoA kinase [Listeria innocua Clip11262]
Swissprottr|Q9ZQH0|COAE_ARATH2.00E-116Dephospho-CoA kinase
trEMBLtr|G7ISC8|G7ISC8_MEDTR2.00E-144Dephospho-CoA kinase {ECO:0000313|EMBL:AES63861.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012635941760900-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00859coaE EC:2.7.1.24 Pantothenate and CoA biosynthesis map00770


Gene Ontology

biological_process

GO:0015937  coenzyme A biosynthetic process


molecular_function

GO:0004140  dephospho-CoA kinase activity

GO:0005524  ATP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001263s00024665.1PF01121.15CoaE31821.30E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.498
SRR1783600control26.607
SRR1783602moderate drought stress21.697
SRR1811619moderate drought stress21.525

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain42.194
DRR006520Root Summer glycyrrhizin high producing strain41.991
DRR006521Root Winter glycyrrhizin high producing strain15.278
DRR006522Root Winter glycyrrhizin high producing strain15.070
DRR006523Root Summer glycyrrhizin low producing strain57.740
DRR006524Root Summer glycyrrhizin low producing strain57.509
DRR006525Leaf Summer glycyrrhizin high producing strain9.200
DRR006526Leaf Summer glycyrrhizin high producing strain9.059

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)131.615
SRR2868004Drought Stress(Tissue:root)157.769
SRR2967015Control (Tissue:root)130.983

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.770
SRR9715740Leave46.615
SRR9715741Leave60.013
SRR9715739Root83.189
SRR9715742Root55.537
SRR9715743Root60.283

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.804
SRR8749028MeJA induced 9h50.409
SRR8749029MeJA induced 9h41.765
SRR8749030Uninduced61.760
SRR8749031Uninduced36.771
SRR8749032Uninduced40.603

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root101.538
SRR8400027Control-Root109.054

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved