Gene detail information of Glyur001277s00024295.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G20575.11.00E-124Nucleotide-diphospho-sugar transferases superfamily protein
NRXP_007153703.12.74E-170hypothetical protein PHAVU_003G057700g [Phaseolus vulgaris]
COGYP_002509243.12.00E-52family 2 glycosyl transferase [Halothermothrix orenii H 168]
trEMBLtr|V7C6B4|V7C6B4_PHAVU1.00E-170Uncharacterized protein {ECO:0000313|EMBL:ESW25697.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012771304016257+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00721DPM1 EC:2.4.1.83 N-Glycan biosynthesis map00510


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001277s00024295.1PF00535.21Glycos_transf_2131813.70E-35


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.273
SRR1783600control10.289
SRR1783602moderate drought stress10.054
SRR1811619moderate drought stress9.554

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.207
DRR006520Root Summer glycyrrhizin high producing strain23.461
DRR006521Root Winter glycyrrhizin high producing strain35.846
DRR006522Root Winter glycyrrhizin high producing strain34.228
DRR006523Root Summer glycyrrhizin low producing strain28.761
DRR006524Root Summer glycyrrhizin low producing strain28.280
DRR006525Leaf Summer glycyrrhizin high producing strain12.087
DRR006526Leaf Summer glycyrrhizin high producing strain10.883

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.682
SRR2868004Drought Stress(Tissue:root)49.673
SRR2967015Control (Tissue:root)44.858

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.770
SRR9715740Leave14.919
SRR9715741Leave12.838
SRR9715739Root2.252
SRR9715742Root9.844
SRR9715743Root8.330

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.410
SRR8749028MeJA induced 9h43.084
SRR8749029MeJA induced 9h55.693
SRR8749030Uninduced55.962
SRR8749031Uninduced103.613
SRR8749032Uninduced60.767

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.322
SRR8400027Control-Root33.534

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved