Gene detail information of Glyur001278s00025625.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G48480.10receptor-like kinase 1
NRXP_003631134.10Atypical receptor-like kinase MARK [Medicago truncatula]
COGYP_004163702.11.00E-18hypothetical protein [Cellulophaga algicola DSM 14237]
Swissprottr|Q9LP77|Y1848_ARATH0Probable inactive receptor kinase At1g48480 (Precursor)
trEMBLtr|G7LE78|G7LE78_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AET05610.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012787581778267+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001278s00025625.1PF08263.7LRRNT_234672.10E-05
Glyur001278s00025625.1PF00069.20Pkinase3686294.20E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.967
SRR1783600control15.288
SRR1783602moderate drought stress12.791
SRR1811619moderate drought stress12.396

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.258
DRR006520Root Summer glycyrrhizin high producing strain13.261
DRR006521Root Winter glycyrrhizin high producing strain0.425
DRR006522Root Winter glycyrrhizin high producing strain0.450
DRR006523Root Summer glycyrrhizin low producing strain9.693
DRR006524Root Summer glycyrrhizin low producing strain9.991
DRR006525Leaf Summer glycyrrhizin high producing strain3.951
DRR006526Leaf Summer glycyrrhizin high producing strain4.041

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.213
SRR2868004Drought Stress(Tissue:root)31.380
SRR2967015Control (Tissue:root)36.993

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.028
SRR9715740Leave1.398
SRR9715741Leave1.475
SRR9715739Root20.709
SRR9715742Root11.012
SRR9715743Root12.935

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.132
SRR8749028MeJA induced 9h9.312
SRR8749029MeJA induced 9h9.605
SRR8749030Uninduced1.872
SRR8749031Uninduced0.445
SRR8749032Uninduced1.677

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.096
SRR8400027Control-Root27.897

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved