Gene detail information of Glyur001282s00029593.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37750.12.00E-104Integrase-type DNA-binding superfamily protein
NRXP_007155799.10hypothetical protein PHAVU_003G232600g [Phaseolus vulgaris]
Swissprottr|Q38914|ANT_ARATH2.00E-134AP2-like ethylene-responsive transcription factor ANT
trEMBLtr|V7CEK3|V7CEK3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27793.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012821112016108-


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001282s00029593.1PF00847.15AP23213774.00E-10
Glyur001282s00029593.1PF00847.15AP24224721.50E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.760
SRR1783600control7.829
SRR1783602moderate drought stress8.898
SRR1811619moderate drought stress8.773

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.569
DRR006520Root Summer glycyrrhizin high producing strain10.413
DRR006521Root Winter glycyrrhizin high producing strain0.928
DRR006522Root Winter glycyrrhizin high producing strain0.880
DRR006523Root Summer glycyrrhizin low producing strain6.076
DRR006524Root Summer glycyrrhizin low producing strain6.057
DRR006525Leaf Summer glycyrrhizin high producing strain0.610
DRR006526Leaf Summer glycyrrhizin high producing strain0.606

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.346
SRR2868004Drought Stress(Tissue:root)13.455
SRR2967015Control (Tissue:root)19.218

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.068
SRR9715740Leave0.424
SRR9715741Leave0.617
SRR9715739Root0.363
SRR9715742Root4.821
SRR9715743Root3.490

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.020
SRR8749028MeJA induced 9h0.128
SRR8749029MeJA induced 9h0.557
SRR8749030Uninduced0.106
SRR8749031Uninduced0.258
SRR8749032Uninduced0.404

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.377
SRR8400027Control-Root15.654

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved