Gene detail information of Glyur001282s00029598.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01282 | 30804 | 31733 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01251 | E3.3.1.1, ahcY | EC:3.3.1.1 | Cysteine and methionine metabolism | map00270 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.873 |
| SRR1783600 | control | 0.892 |
| SRR1783602 | moderate drought stress | 0.836 |
| SRR1811619 | moderate drought stress | 0.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.470 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.758 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.407 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.230 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.263 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.327 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.276 |
| SRR2967015 | Control (Tissue:root) | 1.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.302 |
| SRR9715740 | Leave | 2.653 |
| SRR9715741 | Leave | 0.764 |
| SRR9715739 | Root | 0.965 |
| SRR9715742 | Root | 0.755 |
| SRR9715743 | Root | 1.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.751 |
| SRR8749028 | MeJA induced 9h | 2.593 |
| SRR8749029 | MeJA induced 9h | 1.773 |
| SRR8749030 | Uninduced | 0.324 |
| SRR8749031 | Uninduced | 0.008 |
| SRR8749032 | Uninduced | 0.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.446 |
| SRR8400027 | Control-Root | 2.667 |