Gene detail information of Glyur001287s00026977.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G55010.27.00E-143phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
NRXP_004509870.10PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial-like [Cicer arietinum]
COGYP_413296.11.00E-115phosphoribosylformylglycinamidine cyclo-ligase [Nitrosospira multiformis ATCC 25196]
Swissprottr|P52424|PUR5_VIGUN0Phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|B7FJ14|B7FJ14_MEDTR0Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|RuleBase:RU004370}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold012879193782-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01933purM EC:6.3.3.1 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006189  'de novo' IMP biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0004641  phosphoribosylformylglycinamidine cyclo-ligase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001287s00026977.1PF00586.19AIRS951896.70E-17
Glyur001287s00026977.1PF02769.17AIRS_C2293881.90E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.865
SRR1783600control15.616
SRR1783602moderate drought stress14.011
SRR1811619moderate drought stress14.119

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.446
DRR006520Root Summer glycyrrhizin high producing strain24.461
DRR006521Root Winter glycyrrhizin high producing strain26.696
DRR006522Root Winter glycyrrhizin high producing strain25.030
DRR006523Root Summer glycyrrhizin low producing strain25.277
DRR006524Root Summer glycyrrhizin low producing strain24.661
DRR006525Leaf Summer glycyrrhizin high producing strain13.831
DRR006526Leaf Summer glycyrrhizin high producing strain13.728

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.003
SRR2868004Drought Stress(Tissue:root)39.001
SRR2967015Control (Tissue:root)34.048

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.555
SRR9715740Leave23.272
SRR9715741Leave20.753
SRR9715739Root32.635
SRR9715742Root35.496
SRR9715743Root34.940

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h44.156
SRR8749028MeJA induced 9h21.653
SRR8749029MeJA induced 9h21.678
SRR8749030Uninduced13.398
SRR8749031Uninduced13.643
SRR8749032Uninduced15.044

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.523
SRR8400027Control-Root37.583

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved